AppleGFDB:The Apple Gene Function & Gene Family DataBase v1.0
Locus Search:

 

miR160g

miR160g  

Mature Sequence:5'-TGCCTGGCTCCTTGTATGCCA-3'

Precursor Sequence:

TCAAAGGTAAACTAAGTTATGCCTGGCTCCTTGTATGCCACAAGCAGAAGCTTAATCTAT
TTCTTGATTGGCTACTATGGGTGGCGTACAGGGAGCCAAGCATACCCTCTCTATCTTTCT
CCATTTGAGTTGTCCTTCCATTGTTTGCATCATTTTGCTTTGGGACACTTT

Genome Location:Chr4:11754728..11754708
Precursor Coordinates:180..351
MFE:-63.38
MFEI:0.87
GC:42.69
Plant Homologs:

ppt-miR160h;ppt-miR160g;

Structure:
Target:MDP0000750392 
Target Start:1764 
Target End:1784 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCCA-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGGU -5' 
Inhibition Type:Cleavage 
MDP0000750392 
Target:MDP0000120635 
Target Start:250 
Target End:269 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACAUACGG -5' 
Inhibition Type:Cleavage 
MDP0000120635 
Target:MDP0000131481 
Target Start:1507 
Target End:1526 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACAUACGG -5' 
Inhibition Type:Cleavage 
MDP0000131481 
Target:MDP0000221322 
Target Start:1597 
Target End:1616 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACAUACGG -5' 
Inhibition Type:Cleavage 
MDP0000221322 
Target:MDP0000273491 
Target Start:301 
Target End:320 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGG -5' 
Inhibition Type:Cleavage 
MDP0000273491 
Target:MDP0000232116 
Target Start:1303 
Target End:1322 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGG -5' 
Inhibition Type:Cleavage 
MDP0000232116 
Target:MDP0000256621 
Target Start:1612 
Target End:1631 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGG -5' 
Inhibition Type:Cleavage 
MDP0000256621 
Target:MDP0000310751 
Target Start:554 
Target End:574 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCCA-3' 
Target Aligned Fragment:3'- GCGGAACGAGGAACAUACGAU -5' 
Inhibition Type:Cleavage 
MDP0000310751 
Target:MDP0000206446 
Target Start:551 
Target End:571 
miRNA Aligned Fragment:5'-UGCCUGGCUCCUUGUAUGCCA-3' 
Target Aligned Fragment:3'- ACGGACCGGUGAACGAACGGU -5' 
Inhibition Type:Translation 
MDP0000206446 
Target:MDP0000750392 
Target Start:1764 
Target End:1784 
miRNA Aligned Fragment:5'-UGCCUGGCUCCCUGGAUGCCA-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGGU -5' 
Inhibition Type:Cleavage 
MDP0000750392 
Target:MDP0000120635 
Target Start:250 
Target End:269 
miRNA Aligned Fragment:5'-UGCCUGGCUCCCUGGAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACAUACGG -5' 
Inhibition Type:Cleavage 
MDP0000120635 
Target:MDP0000273491 
Target Start:301 
Target End:320 
miRNA Aligned Fragment:5'-UGCCUGGCUCCCUGGAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGG -5' 
Inhibition Type:Cleavage 
MDP0000273491 
Target:MDP0000232116 
Target Start:1303 
Target End:1322 
miRNA Aligned Fragment:5'-UGCCUGGCUCCCUGGAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGG -5' 
Inhibition Type:Cleavage 
MDP0000232116 
Target:MDP0000131481 
Target Start:1507 
Target End:1526 
miRNA Aligned Fragment:5'-UGCCUGGCUCCCUGGAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACAUACGG -5' 
Inhibition Type:Cleavage 
MDP0000131481 
Target:MDP0000221322 
Target Start:1597 
Target End:1616 
miRNA Aligned Fragment:5'-UGCCUGGCUCCCUGGAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACAUACGG -5' 
Inhibition Type:Cleavage 
MDP0000221322 
Target:MDP0000256621 
Target Start:1612 
Target End:1631 
miRNA Aligned Fragment:5'-UGCCUGGCUCCCUGGAUGCC-3' 
Target Aligned Fragment:3'- ACGGACCGAGGGACGUACGG -5' 
Inhibition Type:Cleavage 
MDP0000256621 
Data resource:
Wei et al.

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