AppleGFDB:The Apple Gene Function & Gene Family DataBase v1.0
Locus Search:

 

miR166e*

miR166e*  

Mature Sequence:5'-GGAATGTTGTCTGGCTCGAGG-3'

Precursor Sequence:

CTAGGGTTTCGAAGATGTTGAAGGAGAAGAGGAGCTTTAGCTTTTGAGGGGAATGTTGTC
TGGCTCGAGGACACTTTCCTTGATCTATAATCTCTAGATCAACCGTTATATACCTATACA
TATATCTATATATGTGTTTGTATATGTTGTGTGTATCATCTGCATACATAGATGATCAGG
TTAAGTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTC

Genome Location:Chr7:17828766..17828786
Precursor Coordinates:7..228
MFE:-83.15
MFEI:0.93
GC:40.27
Plant Homologs:

aly-miR166d*;aly-miR166b*;aly-miR166c*;aly-miR166e*;aly-miR166a*;csi-miR166e*;zma-miR166c*;zma-miR166k*;zma-miR166n*;zma-miR166a*;

Structure:
Target:MDP0000238967 
Target Start:1833 
Target End:1853 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAGG-3' 
Target Aligned Fragment:3'- UUUUACAACGGACCGAACUCC -5' 
Inhibition Type:Cleavage 
MDP0000238967 
Target:MDP0000279466 
Target Start:51 
Target End:71 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAGG-3' 
Target Aligned Fragment:3'- UCUUACAGCAGGCUGGGCUUU -5' 
Inhibition Type:Cleavage 
MDP0000279466 
Target:MDP0000453068 
Target Start:51 
Target End:71 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAGG-3' 
Target Aligned Fragment:3'- UCUUACAGCAGGCUGGGCUUU -5' 
Inhibition Type:Cleavage 
MDP0000453068 
Target:MDP0000307668 
Target Start:1752 
Target End:1772 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAGG-3' 
Target Aligned Fragment:3'- UUUUACAACGGGCCGAACUCC -5' 
Inhibition Type:Cleavage 
MDP0000307668 
Target:MDP0000292188 
Target Start:1752 
Target End:1772 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAGG-3' 
Target Aligned Fragment:3'- UUUUACAACGGGCCGAACUCC -5' 
Inhibition Type:Cleavage 
MDP0000292188 
Target:MDP0000161712 
Target Start:895 
Target End:914 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAG-3' 
Target Aligned Fragment:3'- UUUUAUGGCAGACCGAGUUC -5' 
Inhibition Type:Cleavage 
MDP0000161712 
Target:MDP0000247776 
Target Start:1012 
Target End:1031 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAG-3' 
Target Aligned Fragment:3'- UUUUAUGGCAGACCGAGUUC -5' 
Inhibition Type:Cleavage 
MDP0000247776 
Target:MDP0000280476 
Target Start:1743 
Target End:1763 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAGG-3' 
Target Aligned Fragment:3'- UCUUACAAAGGACCGAACUCC -5' 
Inhibition Type:Translation 
MDP0000280476 
Target:MDP0000288921 
Target Start:423 
Target End:442 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAG-3' 
Target Aligned Fragment:3'- CUUUACAACCGGUUGAGCUC -5' 
Inhibition Type:Translation 
MDP0000288921 
Target:MDP0000271818 
Target Start:423 
Target End:442 
miRNA Aligned Fragment:5'-GGAAUGUUGUCUGGCUCGAG-3' 
Target Aligned Fragment:3'- CUUUACAACCGGUUGAGCUC -5' 
Inhibition Type:Translation 
MDP0000271818 
Data resource:
Wei et al.

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