AppleGFDB:The Apple Gene Function & Gene Family DataBase v1.0
Locus Search:

 

miR169f

miR169f  

Mature Sequence:5'-TAGCCAAGGATGACTTGCCTA-3'

Precursor Sequence:

GGTGAAGAGCCGTGTTTGGTAGCCAAGGATGACTTGCCTAATTAGATATCATATATTCAC
AAGTTACTAACAGATTAGTACTTGAGCACATATATATTAGGGTTTCCAGCTAGGCAGTTG
TCCTTCGGCTAATCTGACTGGCTCTTATCTTTCATGCTAGACTTTCCTCTC

Genome Location:Chr3:6780553..6780573
Precursor Coordinates:181..352
MFE:-54.8
MFEI:0.78
GC:40.94
Plant Homologs:

bna-miR169e;bna-miR169c;bna-miR169d;bna-miR169f;far-miR169;sly-miR169d;vvi-miR169y;vvi-miR169x;aqc-miR169a;mtr-miR169f;zma-miR169f;zma-miR169g;zma-miR169o;zma-miR169h;osa-miR169g;osa-miR169n;osa-miR169o;osa-miR169f;ptc-miR169r;sbi-miR169n;sbi-miR169c;sbi-miR169i;sbi-miR169h;sbi-miR169m;sbi-miR169d;

Structure:
Target:MDP0000885534 
Target Start:849 
Target End:868 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- AUUGGUUUCAACUGAACGGA -5' 
Inhibition Type:Translation 
MDP0000885534 
Target:MDP0000263881 
Target Start:1620 
Target End:1639 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- AUUGGUUUCAACUGAACGGA -5' 
Inhibition Type:Translation 
MDP0000263881 
Target:MDP0000183865 
Target Start:438 
Target End:457 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- UUCGGUUCUUACUAAACGGA -5' 
Inhibition Type:Cleavage 
MDP0000183865 
Target:MDP0000164531 
Target Start:915 
Target End:934 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- UUCGGUUCUUACUAAACGGA -5' 
Inhibition Type:Cleavage 
MDP0000164531 
Target:MDP0000279028 
Target Start:963 
Target End:982 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- UUCGGUUCUUACUAAACGGA -5' 
Inhibition Type:Cleavage 
MDP0000279028 
Target:MDP0000375005 
Target Start:875 
Target End:894 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- CUCGGUUCCUACUUAACGGU -5' 
Inhibition Type:Cleavage 
MDP0000375005 
Target:MDP0000314593 
Target Start:667 
Target End:686 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- UUCGGUUCUUACUCAACGGM -5' 
Inhibition Type:Cleavage 
MDP0000314593 
Target:MDP0000146933 
Target Start:1359 
Target End:1378 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- GUCGGUUCUUACUUAACGGC -5' 
Inhibition Type:Cleavage 
MDP0000146933 
Target:MDP0000296077 
Target Start:1632 
Target End:1651 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- GUCGGUUCUUACUUAACGGC -5' 
Inhibition Type:Cleavage 
MDP0000296077 
Target:MDP0000778477 
Target Start:309 
Target End:328 
miRNA Aligned Fragment:5'-UAGCCAAGGAUGACUUGCCU-3' 
Target Aligned Fragment:3'- AUCGGUACCUAUUGUACGGA -5' 
Inhibition Type:Cleavage 
MDP0000778477 
Data resource:
Wei et al.

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